(1)Yedan Liu; Qiming Zhang; Baocai Xing; Nan Luo; Ranran Gao; Kezhuo Yu; Xueda Hu; Zhaode Bu; Jirun Peng; Xianwen Ren; Zemin Zhang ; Immune phenotypic linkage between colorectal cancer and liver metastasis, Cancer Cell, 2022, 40(4): 424-437.e5.
(2)Deng, Zenghua; Huang, Kanghua; Liu, Dongfang; Luo, Nan; Liu, Tingting; Han, Long; Du,Dexiao; Lian, Dongbo; Zhong, Zhaohui; Peng, Jirun ; Key Candidate Prognostic BiomarkersCorrelated with Immune Infiltration in Hepatocellular Carcinoma., J Hepatocell Carcinoma, 2021,8: 1607-1622.
(3)Zhang, Qiming; He, Yao; Luo, Nan; Patel, Shashank J.; Han, Yanjie; Gao, Ranran; Modak,Madhura; Carotta, Sebastian; Haslinger, Christian; Kind, David; Peet, Gregory W.; Zhong, Guojie; Lu, Shuangjia; Zhu, Weihua; Mao, Yilei; Xiao, Mengmeng; Bergmann, Michael; Hu, Xueda; Kerkar, Sid P.; Vogt, Anne B.; Pflanz, Stefan; Liu, Kang; Peng, Jirun; Ren, Xianwen; Zhang, Zemin ; Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma, Cell, 2019, 179(4): 829-845.
(4)Zheng C, Zheng L, Yoo JK, Guo H, Zhang Y, Guo X, Kang B, Hu R, Huang JY, Zhang Q, Liu Z, Dong M, Hu X, Ouyang W, Peng J, Zhang Z. Landscape of infiltrating T cells in liver cancer revealed by single-cell sequencing. Cell, 2017, 169 (7): 1342-1356.e16.
(5)Yang R, Cheng S, Luo N, Gao R, Yu K, Kang B, Wang L, Zhang Q, Fang Q, Zhang L, Li C, He A, Hu X, Peng J, Ren X, Zhang Z. Distinct epigenetic features of tumor-reactive CD8+ T cells in colorectal cancer patients revealed by genome-wide DNA methylation analysis. Genome Biol. 2019 Dec 31;21(1):2. doi: 10.1186/s13059-019-1921-y. PMID: 31892342; PMCID: PMC6937914.
(6)Hou Yu, Guo Huahu, Cao Chen, Li Xianlong, Hu Boqiang, Zhu Ping, Wu Xinglong, Wen Lu, Tang Fuchou, Huang Yanyi, Peng Jirun. Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas. Cell Research, 2016, 26(3):304-319.
(7)Wen Lu, Li Jingyi, Guo Huahu, Liu Xiaomeng, Zheng Shengmin, Zhang Dafang, Zhu Weihua, Qu Jianhui, Guo Limin, Du Dexiao, Jin Xiao, Zhang Yuhao, Gao Yun, Shen Jie, Ge Hao, Tang Fuchou, Huang Yanyi, Peng Jirun. Genome-scale detection of hypermethylated CpG islands in circulating cell-free DNA of hepatocellular carcinoma patients. Cell Research, 2015, 25(11):1250-1264.